COLGeek :
What HD6990 do you have? Are you sure about the switch? On many high-end Radeons, the switch is to enable a backup BIOS in the event you mess the main copy up with a bad overclock. It is for recovery purposes.
Please clarify what make/model of HD6990 you have.
All 6990's come with a switch. Bios 1 is default 820/1250 and bios 2 is AUSUM mode with clocks of 880/1250.
AUSUM - "Antilles Unlocking Switch for Uber Mode"
This bios can also be modified.
@OP
Sounds like you're overheating. Also, Cooler Master has some really questionable power supplies. What exact model is it?