The WD tool probably fixed the directory when it found the bad sectors the first time it ran, automatically. The other disc scans were simply looking for more errors and there weren't any others to find. So that is good! As for the slow copying or micro stuttering, those are usually CPU, Ram, Bus and GPU related issues. Is this 50GB drive a SSD, or is it a small partition on a larger HD? Reason I ask is my first SSD was a Vertex 2 50GB and it notoriously slowed down after a few days. I would re-start on the third or fourth day and everything sped up quite a bit. As a general rule I think I have learned that the OS should be a drive that has at least twice the used space to be free. I now use a Samsung 830 128GB and purposely leave it half full, no more. It is consistently fast, regardless of how long my system has been on. So if the 50 GB partition is part of a larger drive, I would simply recommend that you move the partition and make it about 100GB.