Many people set up their systems this way. (By the way, although you have two "drives", they probably both are Partitions on one HDD unit. But that does not change things for this discussion.) Here is the plan: You set up your system by Installing all your application software on the D: drive. Then you tell Windows and all the app software that all your data files and new downloads should go there also. The aim is to leave only the OS, and little else, on the C: drive.
Why? Not for boot speed. It is a preventive measure in case the C: drive is damaged in some modest way, like data corruption. If that sort of problem can't be fixed easily, the clean solution is to wipe that drive clean and re-install the OS. The "problem" with that solution IF all your stuff is on ONE drive is that you lose everything old! But with all your good stuff on a different D: drive, you don't lose any of it when you wipe the C: drive and re-install Windows.
This does not help you in cases of catastrophic failure of the entire HDD unit, but it certainly does help in more common problem situations.