HDD seen, can transfer files, can't boot. (Motherboard or other issue)

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It seems like it's my motherboard being the problem here, but I'm not sure. I connect any hard disk that isn't the three I've had in my computer for a while, and they will not boot or willingly install Windows (it will tell me it's unable to but will still continue with no obvious problems.) If it is in SATA ports 0-2, I am able to install Windows (though it tells me it can't) but it still won't boot. SATA ports 3-5 just don't work for it at all.

When I try booting from a disk that isn't one of the three I mentioned earlier, it gives me a 0xc00000e error. I know it isn't the hard disks, because I can still install and boot Windows Vista or Windows 7 on them without any problems on other computers, and I can still transfer files to and from the disks. They just won't boot, but only on this computer, though I'm not sure what part of the build is causing the issue, the installations made on this computer also won't work on other computers, but will if made on the other computers with the same iso.

I have a bunch of other stuff that I don't think draws too much power, but I'm still wondering if it may be that the PSU doesn't have a great enough output or something. But then, I don't see why that would still allow me to transfer files to and from the disks. This has all caused me a lot of frustration and the hours of arranging disks in different ways and installing operating systems over and over again.

OS: Windows 7 Home Premium x64
Motherboard: Gigabyte 970A-DS3P
Memory: 1x Crucial Ballistix Sport XT 8GB DDR3 @ 1866MHz
CPU: AMD FX-8320 8-Core AM3+ @ 3.5GHz
GPU: EVGA Nvidia GeForce GT 740
PSU: Rosewill RD700 (700W)
Hard Disks: Seagate ST640LM000 HM641JI, SAMSUNG HM641JI, TOSHIBA MK5065GSX,
and the two other disks I'm trying are a Seagate ST3320418AS and a Hitachi Deskstar 0A33663.
 
Solution
It seems like you said at first the mobo is the issue, I guess the last option is to flash it's BIOS to latest version and see if that solves the problem, otherwise it's time to RMA it.
Only one question, what mode are your SATA ports under BIOS? (AHCI, IDE, RAID, or maybe another option?)

If BIOS has that option different to the one that was used when installing the OS on a disk it will cause the 0xe error you're getting, under AHCI and IDE mode should however allow a fresh installation with no issues, I wonder if you have it in a mode that's neither of those.
 
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I suppose I should have actually posted it as a reply. As I said, the BIOS option is set in IDE, as it was originally, and AHCI and RAID are the only other two options.
 
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I actually did flash it, though I don't know what it means to RMA it.