The difference is that SLI performance scaling is not linear. To put it simply, with SLI 1+1 does not equal 2, it equals about 1.5 (and 3 way is barely 2 times the performance of a single card). On top of this, not all games support SLI. Most triple-A games do, but not all of them (and most smaller games don't). As a result, if you're dependent on your SLI setup and can't make do with the single-card performance, you may find yourself unable to fully enjoy games that don't have good support for SLI. Also, at higher resolutions you may often have issues because the VRAM of the cards does not stack, so you may end up with too little VRAM.
Nvidia has also dumped 3-way SLI with their newer cards, so while this doesn't directly affect you right now, game developers will likely ditch 3-way support entirely in the near future, leaving your third card more or less as dead weight.
This is why I'm recommending you wait until Nvidia launches the 1080 Ti. You'll likely be able to afford 2 of them if you sell your 3 GTX 980s and add some money, and be in a much better situation.