Bundles 1 & 2 are for USB connections and Bundle 3 is for speaker and mic connections. Must be a cheap case not to have the wires already in the proper plugs so they can just plug into the motherboard. The motherboard manual should have a diagram of the corisponding connections on the motherboard.
I forgot to mention that the ASUS P5Q manual's chassis diagram does not match the chassis wire labels that I listed in my first post which is why all the confusion is present. If anyone has experienced this and knows how I should match up the cables... please help.