Intake fan (3-pin 100mm) stopped working

The intake fan was working when I first loaded my system, which also houses two smaller rear exhaust fans, but the 100mm front fan is the only thing plugged into the 3-pin on the motherboard. The rear fans are powered by the 4-pin connectors. The front fan stopped working, so I replaced it, but the new fan doesn't work it a motherboard issue or something in the BIOS?
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  1. More detail needed here, list the rest of your system please...
    My front fan has 4pin connector, i never see a 3pin power connector before......
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