[fixed]I figure that much. I have Antecs 920 liquid cooling going to the CPU fan header. The motherboard has one 4-pin fan header, two 3-pin fan header, and one 3 pin power fan header....[/fixed]I personally don't like to run other fans through the mobo, as it would use the power and increase the danger of having any electrical issues with mobo. I have Antec P180 and I use the fans on low setting, I use about 5 or 6 fans + the CPU fan.
[fixed]case has three x120 mm fan at front, one x120 mm rear fan (supposed to be two but replacing that with the fan/radiator for the Antec 920), and two x140 mm top fans[/fixed]do u have the radiator outside? I would, it will keep the components inside cooler.
[fixed]Hooking up the fan to the motherboard, i don't have to worry about manually adjusting the fans (although the rear and top fans have manual control located on the back).....should I hook up the intake fans (front) or rear/top that blows air out to the motherboard? I appreciate your input.[/fixed]U don't have to worry that much with water cooling at all : )
I personally don't like to run other fans through the mobo, as it would use the power and increase the danger of having any electrical issues with mobo.