New Build Won't Boot Up(D6 motherboard code)

I just finished putting together my new build.
Intel 2500K
ASrock Extreme 4
MSI 560Ti

When I try to boot up it gives me an error of no console output device found(D6 on the motherboard LED). I tried my older video card( Asus 6850) and it still gives me the same error. Anyone know what could be happening?
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More about build boot motherboard code
  1. Update : Seems like if I use the middle PCIE slot(the other 16x one) it boots up fine...this mean I have a bad PCIE slot or am I doing something wrong?
  2. Anyone know what the problem could be?
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