Computer boots up to black screen

So recently I cured my computer (i think) from the ZeroAccess rootkit. After everything was fixed, i used it for a day, then ran TDSSKILLER just to be safe, and it picked up something.. and deleted it. I guess it was an important file because after i restarted my computer, it just boots up to a black screen before the windows startup bar even shows.

I have the hard drive attached and can access all the files/folders, is there anything I can do to get the hard drive working again?
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