Seems you were right, Thanks,two of the pins that go in weren't seated right, pulled of easily,while the top two were seated in firmly. This might of caused the over heating.
So after trying to reseat it, it seems that the plastic cover of the pins .. http://i.imgur.com/3VIMv.png
are a bit bent, not that much but when i try to insert them into the holes, the plastic cover stays outside the hole and pushes into a 45 degree against the Mobo.
I guess it would be retarded to cut the plastic off as the black pins alone wont seat correctly?